Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA3P32297 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA3P32297 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA3P32297 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA3P32297 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.81■□□□□ 0.12
CHRNA3P32297 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 AC134915.1-201ENST00000426461 574 ntBASIC15.81■□□□□ 0.12
CHRNA3P32297 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.81■□□□□ 0.12
CHRNA3P32297 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 AL359711.2-201ENST00000563105 872 ntBASIC15.81■□□□□ 0.12
CHRNA3P32297 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
CHRNA3P32297 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 AL049840.4-201ENST00000602422 811 ntBASIC15.81■□□□□ 0.12
CHRNA3P32297 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
CHRNA3P32297 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CHRNA3P32297 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRNA3P32297 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRNA3P32297 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA3P32297 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 AC018665.1-201ENST00000622927 1362 ntBASIC15.8■□□□□ 0.12
CHRNA3P32297 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA3P32297 TTTY23B-201ENST00000442790 549 ntBASIC15.8■□□□□ 0.12
CHRNA3P32297 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA3P32297 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA3P32297 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRNA3P32297 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRNA3P32297 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRNA3P32297 AL359881.3-201ENST00000602640 1721 ntBASIC15.8■□□□□ 0.12
CHRNA3P32297 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRNA3P32297 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms