Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
SHC1P29353 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 AC012508.2-201ENST00000567613 1472 ntBASIC13.76□□□□□ -0.21
SHC1P29353 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
SHC1P29353 AL360270.3-201ENST00000609118 1348 ntBASIC13.76□□□□□ -0.21
SHC1P29353 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SHC1P29353 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SHC1P29353 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.76□□□□□ -0.21
SHC1P29353 KLF2P2-201ENST00000416807 1039 ntBASIC13.76□□□□□ -0.21
SHC1P29353 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.76□□□□□ -0.21
SHC1P29353 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 AC068587.3-201ENST00000526613 355 ntBASIC13.76□□□□□ -0.21
SHC1P29353 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.76□□□□□ -0.21
SHC1P29353 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.76□□□□□ -0.21
SHC1P29353 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.76□□□□□ -0.21
SHC1P29353 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 AC097359.2-201ENST00000604992 2389 ntBASIC13.76□□□□□ -0.21
SHC1P29353 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.76□□□□□ -0.21
SHC1P29353 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 AC079781.5-202ENST00000641784 3743 ntBASIC13.76□□□□□ -0.21
SHC1P29353 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SHC1P29353 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SHC1P29353 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SHC1P29353 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.75□□□□□ -0.21
SHC1P29353 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.75□□□□□ -0.21
SHC1P29353 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SHC1P29353 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms