Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AL022328.3-201ENST00000607943 679 ntBASIC13.56□□□□□ -0.24
GDF1P27539 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.56□□□□□ -0.24
GDF1P27539 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 AL136301.1-201ENST00000615830 422 ntBASIC13.56□□□□□ -0.24
GDF1P27539 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 AL138725.1-201ENST00000407347 1314 ntBASIC13.56□□□□□ -0.24
GDF1P27539 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 ACE3P-201ENST00000423435 1973 ntBASIC13.56□□□□□ -0.24
GDF1P27539 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.56□□□□□ -0.24
GDF1P27539 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GDF1P27539 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.56□□□□□ -0.24
GDF1P27539 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
GDF1P27539 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
GDF1P27539 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 AC092384.3-202ENST00000564646 2873 ntBASIC13.55□□□□□ -0.24
GDF1P27539 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
GDF1P27539 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.55□□□□□ -0.24
GDF1P27539 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.55□□□□□ -0.24
GDF1P27539 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 CHMP1AP1-201ENST00000445563 662 ntBASIC13.55□□□□□ -0.24
GDF1P27539 HSPB1P2-201ENST00000448722 546 ntBASIC13.55□□□□□ -0.24
GDF1P27539 AL591846.1-201ENST00000451736 433 ntBASIC13.55□□□□□ -0.24
GDF1P27539 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.55□□□□□ -0.24
GDF1P27539 AC099548.2-209ENST00000480264 625 ntBASIC13.55□□□□□ -0.24
GDF1P27539 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.55□□□□□ -0.24
GDF1P27539 GPR182-203ENST00000622922 591 ntBASIC13.55□□□□□ -0.24
GDF1P27539 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 AC023157.3-201ENST00000619086 2088 ntBASIC13.55□□□□□ -0.24
GDF1P27539 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.55□□□□□ -0.24
GDF1P27539 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.55□□□□□ -0.24
GDF1P27539 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 AC003102.2-201ENST00000589195 1469 ntBASIC13.55□□□□□ -0.24
GDF1P27539 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
GDF1P27539 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GDF1P27539 AC009093.2-202ENST00000620513 2079 ntBASIC13.54□□□□□ -0.24
GDF1P27539 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 RN7SKP230-201ENST00000365642 335 ntBASIC13.54□□□□□ -0.24
GDF1P27539 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.54□□□□□ -0.24
GDF1P27539 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 AC100850.1-201ENST00000506768 649 ntBASIC13.54□□□□□ -0.24
GDF1P27539 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GDF1P27539 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.54□□□□□ -0.24
GDF1P27539 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.54□□□□□ -0.24
GDF1P27539 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.54□□□□□ -0.24
GDF1P27539 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.54□□□□□ -0.24
GDF1P27539 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.54□□□□□ -0.24
GDF1P27539 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms