Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.28■□□□□ 0.2
VTNP04004 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 AC106872.11-201ENST00000605838 421 ntBASIC16.28■□□□□ 0.2
VTNP04004 CU633904.3-201ENST00000624042 1029 ntBASIC16.28■□□□□ 0.2
VTNP04004 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.28■□□□□ 0.2
VTNP04004 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VTNP04004 AC092384.3-202ENST00000564646 2873 ntBASIC16.28■□□□□ 0.2
VTNP04004 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.27■□□□□ 0.2
VTNP04004 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
VTNP04004 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VTNP04004 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.27■□□□□ 0.2
VTNP04004 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VTNP04004 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VTNP04004 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
VTNP04004 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.27■□□□□ 0.2
VTNP04004 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.27■□□□□ 0.2
VTNP04004 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.27■□□□□ 0.2
VTNP04004 AC024681.1-201ENST00000521917 487 ntBASIC16.27■□□□□ 0.2
VTNP04004 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.27■□□□□ 0.2
VTNP04004 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.27■□□□□ 0.2
VTNP04004 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.27■□□□□ 0.2
VTNP04004 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.27■□□□□ 0.2
VTNP04004 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.27■□□□□ 0.2
VTNP04004 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.27■□□□□ 0.2
VTNP04004 AC009884.2-201ENST00000603110 324 ntBASIC16.27■□□□□ 0.2
VTNP04004 AC091812.3-201ENST00000621362 345 ntBASIC16.27■□□□□ 0.2
VTNP04004 AC100757.4-201ENST00000626934 759 ntBASIC16.27■□□□□ 0.2
VTNP04004 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VTNP04004 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.27■□□□□ 0.19
VTNP04004 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.27■□□□□ 0.19
VTNP04004 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.27■□□□□ 0.19
VTNP04004 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.27■□□□□ 0.19
VTNP04004 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
VTNP04004 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
VTNP04004 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
VTNP04004 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
VTNP04004 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VTNP04004 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 FAM90A7P-201ENST00000382628 1395 ntBASIC16.26■□□□□ 0.19
VTNP04004 FAM90A23P-201ENST00000400136 1395 ntBASIC16.26■□□□□ 0.19
VTNP04004 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 AL136172.1-201ENST00000598590 1394 ntBASIC16.26■□□□□ 0.19
VTNP04004 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.26■□□□□ 0.19
VTNP04004 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.26■□□□□ 0.19
VTNP04004 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.26■□□□□ 0.19
VTNP04004 AL157407.1-201ENST00000435784 904 ntBASIC16.26■□□□□ 0.19
VTNP04004 AL133466.1-201ENST00000447582 150 ntBASIC16.26■□□□□ 0.19
VTNP04004 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.26■□□□□ 0.19
VTNP04004 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VTNP04004 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.26■□□□□ 0.19
VTNP04004 RCC2P8-201ENST00000502779 1035 ntBASIC16.26■□□□□ 0.19
VTNP04004 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.26■□□□□ 0.19
VTNP04004 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.26■□□□□ 0.19
VTNP04004 AC009779.1-201ENST00000551138 283 ntBASIC16.26■□□□□ 0.19
VTNP04004 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms