Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.37□□□□□ -0.27
CNOT4O95628 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CNOT4O95628 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CNOT4O95628 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNOT4O95628 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.36□□□□□ -0.27
CNOT4O95628 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.36□□□□□ -0.27
CNOT4O95628 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 PPT1-215ENST00000641471 2368 ntBASIC13.36□□□□□ -0.27
CNOT4O95628 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
CNOT4O95628 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.36□□□□□ -0.27
CNOT4O95628 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 EIF3FP3-201ENST00000434851 1086 ntBASIC13.36□□□□□ -0.27
CNOT4O95628 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.36□□□□□ -0.27
CNOT4O95628 PFN1P12-201ENST00000455938 534 ntBASIC13.36□□□□□ -0.27
CNOT4O95628 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.36□□□□□ -0.27
CNOT4O95628 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.36□□□□□ -0.27
CNOT4O95628 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.36□□□□□ -0.27
CNOT4O95628 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.36□□□□□ -0.27
CNOT4O95628 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CNOT4O95628 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNOT4O95628 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 TNRC18P2-201ENST00000417666 2714 ntBASIC13.35□□□□□ -0.27
CNOT4O95628 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.35□□□□□ -0.27
CNOT4O95628 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.35□□□□□ -0.27
CNOT4O95628 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.35□□□□□ -0.27
CNOT4O95628 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.35□□□□□ -0.27
CNOT4O95628 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.35□□□□□ -0.27
CNOT4O95628 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.35□□□□□ -0.27
CNOT4O95628 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNOT4O95628 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
CNOT4O95628 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.35□□□□□ -0.27
CNOT4O95628 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms