Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PMPCBO75439 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PMPCBO75439 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PMPCBO75439 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.22■□□□□ 0.03
PMPCBO75439 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PMPCBO75439 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 COX5BP8-201ENST00000416911 349 ntBASIC15.22■□□□□ 0.03
PMPCBO75439 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.22■□□□□ 0.03
PMPCBO75439 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.22■□□□□ 0.03
PMPCBO75439 COX20P2-201ENST00000452636 358 ntBASIC15.22■□□□□ 0.03
PMPCBO75439 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.22■□□□□ 0.03
PMPCBO75439 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.22■□□□□ 0.03
PMPCBO75439 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PMPCBO75439 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
PMPCBO75439 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.22■□□□□ 0.03
PMPCBO75439 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PMPCBO75439 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC005912.2-201ENST00000619492 2400 ntBASIC15.21■□□□□ 0.03
PMPCBO75439 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 NME2P1-201ENST00000426182 414 ntBASIC15.21■□□□□ 0.03
PMPCBO75439 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.21■□□□□ 0.03
PMPCBO75439 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.21■□□□□ 0.03
PMPCBO75439 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.21■□□□□ 0.03
PMPCBO75439 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC015936.2-201ENST00000593177 259 ntBASIC15.21■□□□□ 0.03
PMPCBO75439 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PMPCBO75439 ST20-AS1-201ENST00000560255 4223 ntBASIC15.21■□□□□ 0.03
PMPCBO75439 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PMPCBO75439 AC097359.2-201ENST00000604992 2389 ntBASIC15.21■□□□□ 0.03
PMPCBO75439 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 AL138709.1-201ENST00000614840 1693 ntBASIC15.21■□□□□ 0.03
PMPCBO75439 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PMPCBO75439 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PMPCBO75439 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PMPCBO75439 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PMPCBO75439 SALL4P5-201ENST00000419001 1760 ntBASIC15.21■□□□□ 0.02
PMPCBO75439 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PMPCBO75439 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PMPCBO75439 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PMPCBO75439 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
PMPCBO75439 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms