Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 OR8S1-201ENST00000310194 1080 ntBASIC14.08□□□□□ -0.16
LDB3O75112 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LDB3O75112 MIR1202-201ENST00000408529 83 ntBASIC14.08□□□□□ -0.16
LDB3O75112 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 FAM8A4P-201ENST00000435433 1213 ntBASIC14.08□□□□□ -0.16
LDB3O75112 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.08□□□□□ -0.16
LDB3O75112 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.08□□□□□ -0.16
LDB3O75112 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.08□□□□□ -0.16
LDB3O75112 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.08□□□□□ -0.16
LDB3O75112 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 IGHV3-71-201ENST00000523324 359 ntBASIC14.08□□□□□ -0.16
LDB3O75112 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 AP000812.2-201ENST00000538934 718 ntBASIC14.08□□□□□ -0.16
LDB3O75112 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.08□□□□□ -0.16
LDB3O75112 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 OR10B1P-201ENST00000601666 907 ntBASIC14.08□□□□□ -0.16
LDB3O75112 AC017083.2-201ENST00000608069 979 ntBASIC14.08□□□□□ -0.16
LDB3O75112 RHOXF1P1-202ENST00000635473 501 ntBASIC14.08□□□□□ -0.16
LDB3O75112 AC011840.2-201ENST00000563063 1520 ntBASIC14.08□□□□□ -0.16
LDB3O75112 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.08□□□□□ -0.16
LDB3O75112 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LDB3O75112 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.08□□□□□ -0.16
LDB3O75112 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LDB3O75112 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.07□□□□□ -0.16
LDB3O75112 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LDB3O75112 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 AC006001.1-201ENST00000325130 474 ntBASIC14.07□□□□□ -0.16
LDB3O75112 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.07□□□□□ -0.16
LDB3O75112 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.07□□□□□ -0.16
LDB3O75112 AC026954.1-201ENST00000429771 1293 ntBASIC14.07□□□□□ -0.16
LDB3O75112 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.07□□□□□ -0.16
LDB3O75112 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 AC022210.1-201ENST00000449856 793 ntBASIC14.07□□□□□ -0.16
LDB3O75112 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.07□□□□□ -0.16
LDB3O75112 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.07□□□□□ -0.16
LDB3O75112 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.07□□□□□ -0.16
LDB3O75112 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.07□□□□□ -0.16
LDB3O75112 AC106820.3-201ENST00000561653 397 ntBASIC14.07□□□□□ -0.16
LDB3O75112 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.07□□□□□ -0.16
LDB3O75112 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.07□□□□□ -0.16
LDB3O75112 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 FAM45BP-202ENST00000592932 1624 ntBASIC14.07□□□□□ -0.16
LDB3O75112 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LDB3O75112 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LDB3O75112 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms