Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 AC140479.7-201ENST00000636301 2332 ntBASIC14.3□□□□□ -0.12
LCMT2O60294 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.3□□□□□ -0.12
LCMT2O60294 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.3□□□□□ -0.12
LCMT2O60294 IGHV3-71-201ENST00000523324 359 ntBASIC14.3□□□□□ -0.12
LCMT2O60294 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.3□□□□□ -0.12
LCMT2O60294 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.3□□□□□ -0.12
LCMT2O60294 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LCMT2O60294 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.3□□□□□ -0.12
LCMT2O60294 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.3□□□□□ -0.12
LCMT2O60294 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.3□□□□□ -0.12
LCMT2O60294 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 C8orf49-201ENST00000525043 1968 ntBASIC14.3□□□□□ -0.12
LCMT2O60294 AHCYP2-201ENST00000430630 1300 ntBASIC14.3□□□□□ -0.12
LCMT2O60294 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 AP000593.2-201ENST00000542775 1433 ntBASIC14.3□□□□□ -0.12
LCMT2O60294 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.3□□□□□ -0.12
LCMT2O60294 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCMT2O60294 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LCMT2O60294 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.3□□□□□ -0.12
LCMT2O60294 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.29□□□□□ -0.12
LCMT2O60294 CSF2RBP1-201ENST00000447905 391 ntBASIC14.29□□□□□ -0.12
LCMT2O60294 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.29□□□□□ -0.12
LCMT2O60294 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.29□□□□□ -0.12
LCMT2O60294 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LCMT2O60294 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.29□□□□□ -0.12
LCMT2O60294 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.29□□□□□ -0.12
LCMT2O60294 AC017083.2-201ENST00000608069 979 ntBASIC14.29□□□□□ -0.12
LCMT2O60294 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
LCMT2O60294 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
LCMT2O60294 AC007292.2-201ENST00000593524 1812 ntBASIC14.29□□□□□ -0.12
LCMT2O60294 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCMT2O60294 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.29□□□□□ -0.12
LCMT2O60294 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms