Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KLF2P2-201ENST00000416807 1039 ntBASIC14.43□□□□□ -0.1
SLC28A1O00337 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC28A1O00337 AC007969.1-201ENST00000433675 447 ntBASIC14.43□□□□□ -0.1
SLC28A1O00337 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC28A1O00337 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC28A1O00337 MIR8072-201ENST00000614241 80 ntBASIC14.43□□□□□ -0.1
SLC28A1O00337 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A1O00337 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC28A1O00337 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC28A1O00337 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SLC28A1O00337 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
SLC28A1O00337 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 SALL4P5-201ENST00000419001 1760 ntBASIC14.42□□□□□ -0.1
SLC28A1O00337 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 LRRC59-203ENST00000576448 1531 ntBASIC14.42□□□□□ -0.1
SLC28A1O00337 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A1O00337 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SLC28A1O00337 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC28A1O00337 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A1O00337 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLC28A1O00337 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A1O00337 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A1O00337 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 AC124283.3-201ENST00000570869 594 ntBASIC14.42□□□□□ -0.1
SLC28A1O00337 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A1O00337 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A1O00337 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 AC092364.2-202ENST00000597012 1073 ntBASIC14.42□□□□□ -0.1
SLC28A1O00337 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.42□□□□□ -0.1
SLC28A1O00337 AC008761.3-201ENST00000624803 892 ntBASIC14.42□□□□□ -0.1
SLC28A1O00337 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.42□□□□□ -0.1
SLC28A1O00337 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.42□□□□□ -0.1
SLC28A1O00337 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SLC28A1O00337 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLC28A1O00337 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLC28A1O00337 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A1O00337 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 BEND3P1-201ENST00000421591 1944 ntBASIC14.41□□□□□ -0.1
SLC28A1O00337 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A1O00337 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A1O00337 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms