Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 AL645937.2-201ENST00000396808 931 ntBASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TCRBV3S1A0A5B6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AL122018.1-201ENST00000446607 2310 ntBASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AL353779.1-201ENST00000434793 351 ntBASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AC140113.2-201ENST00000604370 208 ntBASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AL589739.1-201ENST00000607720 493 ntBASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV3S1A0A5B6 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms