Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.83■■□□□ 1.09
CDC42BPBQ9Y5S2 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 RN7SL494P-201ENST00000461517 304 ntBASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 AC012158.2-201ENST00000536546 354 ntBASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 AP005264.6-204ENST00000588436 719 ntBASIC21.83■■□□□ 1.08
CDC42BPBQ9Y5S2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 AC064801.2-201ENST00000625052 1303 ntBASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 ACTBP7-201ENST00000418351 1124 ntBASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 AP003392.6-201ENST00000607709 325 ntBASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDC42BPBQ9Y5S2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 AC025186.1-201ENST00000478174 870 ntBASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 TREHP1-201ENST00000531328 465 ntBASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 AC020763.4-201ENST00000623414 4170 ntBASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 AC021305.1-201ENST00000520656 1514 ntBASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 KRT8P43-201ENST00000406052 1458 ntBASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC21.81■■□□□ 1.08
CDC42BPBQ9Y5S2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AC018442.1-201ENST00000421439 2061 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 EEF1DP2-201ENST00000433698 843 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 GNG10P1-201ENST00000452289 199 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 RNF146-211ENST00000609447 607 ntTSL 4 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AC006483.2-201ENST00000609813 515 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 FUCA1P1-201ENST00000374476 1351 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 DDX39AP1-201ENST00000445147 1181 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AGPAT5P1-201ENST00000455855 1019 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 CHCHD2P2-201ENST00000503744 321 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 AC008972.2-201ENST00000606587 494 ntBASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC42BPBQ9Y5S2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms