Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 AC126365.1-201ENST00000578585 1514 ntBASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTDP1Q9Y5B0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 AP000845.1-201ENST00000581677 2131 ntBASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 AC004923.1-202ENST00000642106 209 ntBASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 SALL4P5-201ENST00000419001 1760 ntBASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.25■□□□□ 0.35
CTDP1Q9Y5B0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC009093.2-202ENST00000620513 2079 ntBASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC016700.1-201ENST00000429424 312 ntBASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AL133466.1-201ENST00000447582 150 ntBASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 DUX4L46-201ENST00000566845 751 ntBASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTDP1Q9Y5B0 AC112693.3-201ENST00000624819 1983 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms