Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AC236430.1-201ENST00000402231 743 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 TLE1P1-201ENST00000422965 589 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AL158211.1-201ENST00000566763 763 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 MIR4745-201ENST00000577608 62 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 AC008494.3-201ENST00000606615 944 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 CU634019.7-201ENST00000624153 1185 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 FP236241.2-201ENST00000624906 1185 ntBASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
VPS9D1Q9Y2B5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 GOLGA8DP-202ENST00000341390 2184 ntBASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC110792.4-201ENST00000609843 298 ntBASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC109809.1-201ENST00000619665 545 ntBASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC005252.2-201ENST00000624630 1141 ntBASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC006927.4-201ENST00000639187 543 ntBASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 AC055811.4-201ENST00000624039 1754 ntBASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS9D1Q9Y2B5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS9D1Q9Y2B5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS9D1Q9Y2B5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VPS9D1Q9Y2B5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms