Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 AC017083.2-201ENST00000608069 979 ntBASIC16.4■□□□□ 0.22
L1RE1Q9UN81 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 PRSS30P-206ENST00000641773 873 ntBASIC16.4■□□□□ 0.22
L1RE1Q9UN81 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 AC113367.3-201ENST00000508316 1912 ntBASIC16.4■□□□□ 0.22
L1RE1Q9UN81 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
L1RE1Q9UN81 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
L1RE1Q9UN81 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
L1RE1Q9UN81 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
L1RE1Q9UN81 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
L1RE1Q9UN81 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 FTH1P14-201ENST00000482930 551 ntBASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AC119751.2-201ENST00000504529 210 ntBASIC16.39■□□□□ 0.21
L1RE1Q9UN81 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.39■□□□□ 0.21
L1RE1Q9UN81 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 AP001267.2-201ENST00000532619 2086 ntBASIC16.39■□□□□ 0.21
L1RE1Q9UN81 KRT8P35-201ENST00000483942 1338 ntBASIC16.39■□□□□ 0.21
L1RE1Q9UN81 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 PDIA3P1-201ENST00000471856 1510 ntBASIC16.39■□□□□ 0.21
L1RE1Q9UN81 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
L1RE1Q9UN81 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.38■□□□□ 0.21
L1RE1Q9UN81 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 NUS1P3-201ENST00000423502 862 ntBASIC16.38■□□□□ 0.21
L1RE1Q9UN81 GHSR-202ENST00000427970 912 ntBASIC16.38■□□□□ 0.21
L1RE1Q9UN81 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 KRT18P25-201ENST00000508931 1278 ntBASIC16.38■□□□□ 0.21
L1RE1Q9UN81 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.38■□□□□ 0.21
L1RE1Q9UN81 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms