Protein–RNA interactions for Protein: Q9P2K3

RCOR3, REST corepressor 3, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3Q9P2K3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ARSEP1-201ENST00000420443 635 ntBASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC103988.2-201ENST00000561804 725 ntBASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC020910.5-201ENST00000623668 1865 ntBASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 AC026748.1-201ENST00000624349 3251 ntBASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RCOR3Q9P2K3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AL590440.2-201ENST00000641973 1595 ntBASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 FAM197Y7-201ENST00000432892 766 ntBASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 FAM8A4P-201ENST00000435433 1213 ntBASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 PUDPP3-201ENST00000445368 636 ntBASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 KRT17P7-201ENST00000451704 1104 ntBASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AC007551.1-201ENST00000457394 519 ntBASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCOR3Q9P2K3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 AC139712.1-201ENST00000378256 1875 ntBASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.33■□□□□ 0.05
RCOR3Q9P2K3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCOR3Q9P2K3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RCOR3Q9P2K3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms