Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 POM121L13P-201ENST00000422362 380 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 TSPY9P-201ENST00000440215 945 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 TSPY11P-201ENST00000442607 1045 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 FAAHP1-202ENST00000446499 1238 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MIR3180-4-201ENST00000582223 153 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AKR1B10-201ENST00000359579 1590 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AL359075.2-201ENST00000354921 4998 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 AC008158.1-201ENST00000578759 3668 ntBASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CDC42SE1Q9NRR8 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF304-204ENST00000598744 3331 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 AP003355.2-201ENST00000605923 2622 ntBASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 HS6ST1P1-201ENST00000481504 1234 ntBASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 RAP2CP1-201ENST00000605103 478 ntBASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 EGFR-211ENST00000638463 4735 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 U82695.1-201ENST00000635752 1889 ntBASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC7.44□□□□□ -1.22
CDC42SE1Q9NRR8 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms