Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FAM45BP-202ENST00000592932 1624 ntBASIC13.79□□□□□ -0.2
UBQLN4Q9NRR5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBQLN4Q9NRR5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN4Q9NRR5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.79□□□□□ -0.2
UBQLN4Q9NRR5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 FTLP10-202ENST00000505798 471 ntBASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 RNA5SP486-201ENST00000515961 83 ntBASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBQLN4Q9NRR5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
UBQLN4Q9NRR5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AL138725.1-201ENST00000407347 1314 ntBASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 TMEM14DP-201ENST00000422205 345 ntBASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 CLUHP2-201ENST00000426660 1303 ntBASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
UBQLN4Q9NRR5 AC138466.3-201ENST00000619983 221 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms