Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 PAUPAR-201ENST00000630360 2965 ntBASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNTNAP3Q9BZ76 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC067930.6-201ENST00000623257 4947 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AL137077.2-201ENST00000635124 1608 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 DKKL1P1-201ENST00000400550 698 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC136604.1-201ENST00000418535 575 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PHKG1P2-201ENST00000457537 863 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 RN7SL121P-201ENST00000584223 273 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 LINC01783-202ENST00000614408 828 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 BX284668.2-205ENST00000619677 828 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 KRT8P21-201ENST00000430398 1491 ntBASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNTNAP3Q9BZ76 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CNTNAP3Q9BZ76 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms