Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC02029-201ENST00000469196 1497 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 CCDC75P1-201ENST00000469247 791 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 OR2A3P-201ENST00000493774 953 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 OR9N1P-202ENST00000494289 481 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC079140.5-201ENST00000507882 310 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 HDAC2-AS2-215ENST00000522697 786 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AL117187.1-201ENST00000555482 181 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC104041.1-202ENST00000560097 566 ntTSL 4 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AL596325.1-201ENST00000563991 1082 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC024614.2-201ENST00000577584 372 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL17P45-201ENST00000586289 509 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC093503.2-201ENST00000597609 296 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AL591742.1-201ENST00000604433 565 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AL627309.6-201ENST00000606857 840 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC016405.3-201ENST00000607710 860 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC104506.1-201ENST00000609247 429 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AC009237.16-201ENST00000612987 506 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AP001271.2-201ENST00000624018 1556 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 RALB-208ENST00000631312 311 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 MIR1302-1-201ENST00000637932 143 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 MYCNOS-205ENST00000641950 531 ntBASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP3-3Q9BYR6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SNRNP35-203ENST00000526639 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AL138781.2-201ENST00000617896 1843 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 NUP58P1-201ENST00000502546 1738 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 KRT16P6-202ENST00000425692 1426 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ZNF396-204ENST00000586687 1320 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 Y_RNA.72-201ENST00000362894 103 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SNORD56.2-201ENST00000363242 71 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 Y_RNA.257-201ENST00000364596 102 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ETNK2-201ENST00000367197 843 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 KRT19P1-201ENST00000405746 1186 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 FAM192BP-201ENST00000414628 762 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AL157698.1-201ENST00000415190 1011 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 ARL2BPP3-201ENST00000421226 480 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 AC093084.1-201ENST00000424233 687 ntBASIC9.68□□□□□ -0.86
KRTAP3-3Q9BYR6 NME6-207ENST00000426689 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms