Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14□□□□□ -0.17
TM9SF2Q99805 AL607033.1-201ENST00000623900 1599 ntBASIC14□□□□□ -0.17
TM9SF2Q99805 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TM9SF2Q99805 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TM9SF2Q99805 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 KRT8P22-201ENST00000562317 1415 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 AC134915.1-201ENST00000426461 574 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 KRT18P64-201ENST00000434946 1219 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 U91328.1-201ENST00000437528 223 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 ENPP7P5-201ENST00000541031 1031 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 BRI3BPP1-201ENST00000594224 787 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.99□□□□□ -0.17
TM9SF2Q99805 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TM9SF2Q99805 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TM9SF2Q99805 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 SOCS2P1-201ENST00000417727 557 ntBASIC13.98□□□□□ -0.17
TM9SF2Q99805 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 ATP5G2P4-201ENST00000442175 420 ntBASIC13.98□□□□□ -0.17
TM9SF2Q99805 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF2Q99805 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF2Q99805 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms