Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AC026979.3-201ENST00000607315 403 ntBASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MIR7706-201ENST00000613747 67 ntBASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AC025580.3-201ENST00000617932 1424 ntBASIC11.42□□□□□ -0.58
AP1S3Q96PC3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AJ011931.1-201ENST00000618749 2492 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AL139010.1-201ENST00000454878 894 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC112191.1-201ENST00000523689 701 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 RARRES2P8-201ENST00000566335 367 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC012313.10-201ENST00000623509 926 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC148477.8-201ENST00000624298 468 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC136759.1-202ENST00000530858 2194 ntBASIC11.41□□□□□ -0.58
AP1S3Q96PC3 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AP1S3Q96PC3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.4□□□□□ -0.58
AP1S3Q96PC3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms