Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC7Q96M83 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 CD8B2-202ENST00000417670 633 ntBASIC20.7■□□□□ 0.9
CCDC7Q96M83 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC7Q96M83 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 HOMER2P2-201ENST00000451621 847 ntBASIC20.69■□□□□ 0.9
CCDC7Q96M83 BX284668.4-201ENST00000453917 508 ntBASIC20.69■□□□□ 0.9
CCDC7Q96M83 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 MIR4683-201ENST00000579659 81 ntBASIC20.69■□□□□ 0.9
CCDC7Q96M83 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC7Q96M83 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CCDC7Q96M83 AC015818.8-201ENST00000587907 1519 ntBASIC20.68■□□□□ 0.9
CCDC7Q96M83 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC7Q96M83 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 MIR1202-201ENST00000408529 83 ntBASIC20.68■□□□□ 0.9
CCDC7Q96M83 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 BX088702.1-201ENST00000610784 235 ntBASIC20.68■□□□□ 0.9
CCDC7Q96M83 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC7Q96M83 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 FAM8A4P-201ENST00000435433 1213 ntBASIC20.67■□□□□ 0.9
CCDC7Q96M83 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 AC103988.2-201ENST00000561804 725 ntBASIC20.67■□□□□ 0.9
CCDC7Q96M83 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 AC020914.3-201ENST00000594712 304 ntBASIC20.67■□□□□ 0.9
CCDC7Q96M83 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC7Q96M83 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC7Q96M83 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms