Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MIR6869-201ENST00000619434 62 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC007292.2-201ENST00000593524 1812 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC005912.2-201ENST00000619492 2400 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 MIR600HG-201ENST00000449175 5984 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 AC140479.7-201ENST00000636301 2332 ntBASIC17.83■□□□□ 0.44
DDX11Q96FC9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.83■□□□□ 0.44
DDX11Q96FC9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
DDX11Q96FC9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AL360270.3-201ENST00000609118 1348 ntBASIC17.82■□□□□ 0.44
DDX11Q96FC9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AC004066.1-201ENST00000502488 802 ntBASIC17.82■□□□□ 0.44
DDX11Q96FC9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 GPR182-203ENST00000622922 591 ntBASIC17.82■□□□□ 0.44
DDX11Q96FC9 RHOXF1P1-202ENST00000635473 501 ntBASIC17.82■□□□□ 0.44
DDX11Q96FC9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
DDX11Q96FC9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
DDX11Q96FC9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
DDX11Q96FC9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
DDX11Q96FC9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms