Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
DDX1Q92499 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
DDX1Q92499 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 AC027601.5-201ENST00000624065 2482 ntBASIC15.89■□□□□ 0.13
DDX1Q92499 AC020910.5-201ENST00000623668 1865 ntBASIC15.89■□□□□ 0.13
DDX1Q92499 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
DDX1Q92499 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
DDX1Q92499 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.89■□□□□ 0.13
DDX1Q92499 AC099336.1-201ENST00000417053 1171 ntBASIC15.89■□□□□ 0.13
DDX1Q92499 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.89■□□□□ 0.13
DDX1Q92499 GCOM2-201ENST00000509133 1104 ntBASIC15.89■□□□□ 0.13
DDX1Q92499 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.89■□□□□ 0.13
DDX1Q92499 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.89■□□□□ 0.13
DDX1Q92499 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.89■□□□□ 0.13
DDX1Q92499 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.89■□□□□ 0.13
DDX1Q92499 AC138466.3-201ENST00000619983 221 ntBASIC15.89■□□□□ 0.13
DDX1Q92499 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.89■□□□□ 0.13
DDX1Q92499 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
DDX1Q92499 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
DDX1Q92499 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
DDX1Q92499 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.89■□□□□ 0.13
DDX1Q92499 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 SLC25A24P2-201ENST00000415059 510 ntBASIC15.88■□□□□ 0.13
DDX1Q92499 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.88■□□□□ 0.13
DDX1Q92499 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.88■□□□□ 0.13
DDX1Q92499 AL391280.1-201ENST00000506969 1062 ntBASIC15.88■□□□□ 0.13
DDX1Q92499 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.88■□□□□ 0.13
DDX1Q92499 AC025279.2-201ENST00000569730 653 ntBASIC15.88■□□□□ 0.13
DDX1Q92499 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.88■□□□□ 0.13
DDX1Q92499 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
DDX1Q92499 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.88■□□□□ 0.13
DDX1Q92499 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.88■□□□□ 0.13
DDX1Q92499 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.88■□□□□ 0.13
DDX1Q92499 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
DDX1Q92499 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms