Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AC105021.1-202ENST00000570572 669 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AL773604.1-201ENST00000617417 272 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AC215219.1-201ENST00000400706 1817 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 AC072061.1-201ENST00000569710 2234 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM4Q8WVI0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 Z97205.2-201ENST00000564697 1639 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AC015922.1-201ENST00000421102 1152 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AC243562.1-201ENST00000560672 389 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AC034105.1-201ENST00000563488 319 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 Z83851.2-201ENST00000609564 659 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 MIR6074-201ENST00000612054 107 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AGAP10P-201ENST00000454844 2418 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 AL031595.1-201ENST00000623969 4709 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 KRT8P12-202ENST00000472924 1397 ntBASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM4Q8WVI0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 AL137783.1-201ENST00000623494 1896 ntBASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM4Q8WVI0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms