Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AL139094.1-201ENST00000405549 1188 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AL162726.2-201ENST00000438986 1017 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 RN7SL752P-201ENST00000463779 287 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ENPP7P5-201ENST00000541031 1031 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 IGHV3-72-202ENST00000621503 303 ntBASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.18□□□□□ -0.14
SIMC1Q8NDZ2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 EIF3FP3-201ENST00000434851 1086 ntBASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 KRT17P7-201ENST00000451704 1104 ntBASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 MIR5189-201ENST00000577370 114 ntBASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.17□□□□□ -0.14
SIMC1Q8NDZ2 KRT8P14-201ENST00000414254 1442 ntBASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SIMC1Q8NDZ2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms