Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 LINC01101-201ENST00000622953 1884 ntBASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 AC104989.1-201ENST00000519711 778 ntBASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 AC017083.2-201ENST00000608069 979 ntBASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 AC023090.2-201ENST00000625182 2110 ntBASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB42Q8N4Z0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB42Q8N4Z0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 SALL4P5-201ENST00000419001 1760 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 CNN2P8-201ENST00000421872 913 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC112492.5-201ENST00000421897 457 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 FAM197Y7-201ENST00000432892 766 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 FAM8A4P-201ENST00000435433 1213 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 RPL7P3-201ENST00000441388 714 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC023310.1-201ENST00000554836 735 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ECM1P1-201ENST00000604092 1279 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC006453.4-201ENST00000636949 1252 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC013726.1-201ENST00000563747 2285 ntBASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB42Q8N4Z0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms