Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 AC003102.2-201ENST00000589195 1469 ntBASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 AC092384.3-202ENST00000564646 2873 ntBASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.77■□□□□ 0.11
SCN4BQ8IWT1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 GPAA1P2-201ENST00000417923 928 ntBASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AP001258.2-201ENST00000529891 490 ntBASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
SCN4BQ8IWT1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ZNF767P-206ENST00000513792 565 ntBASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AC005730.2-201ENST00000564549 1184 ntBASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AC007663.3-201ENST00000609632 465 ntBASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AGAP7P-201ENST00000582299 2062 ntBASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 AGAP14-201ENST00000624701 2060 ntBASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SCN4BQ8IWT1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms