Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC004466.1-201ENST00000599515 1080 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 AC138696.2-201ENST00000607376 223 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 AC132938.4-201ENST00000623835 848 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDH1Q08174 BX640514.1-201ENST00000583223 1918 ntBASIC14.45□□□□□ -0.1
PCDH1Q08174 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDH1Q08174 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDH1Q08174 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.44□□□□□ -0.1
PCDH1Q08174 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 AC027307.3-201ENST00000594262 1100 ntBASIC14.44□□□□□ -0.1
PCDH1Q08174 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 BX088702.1-201ENST00000610784 235 ntBASIC14.44□□□□□ -0.1
PCDH1Q08174 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDH1Q08174 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDH1Q08174 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCDH1Q08174 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PCDH1Q08174 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 AC134312.5-201ENST00000568031 1313 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PCDH1Q08174 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 SALL4P5-201ENST00000419001 1760 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDH1Q08174 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 AP006294.1-201ENST00000415407 339 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDH1Q08174 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDH1Q08174 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDH1Q08174 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDH1Q08174 GCOM2-201ENST00000509133 1104 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 AC068587.3-201ENST00000526613 355 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCDH1Q08174 NIFKP4-201ENST00000567275 1192 ntBASIC14.43□□□□□ -0.1
PCDH1Q08174 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDH1Q08174 AC145423.3-201ENST00000615987 467 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 527.8 ms