Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC19.36■□□□□ 0.69
COL16A1Q07092 NAT9-219ENST00000582524 573 ntTSL 4 BASIC19.36■□□□□ 0.69
COL16A1Q07092 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL16A1Q07092 AC087072.1-201ENST00000603727 421 ntBASIC19.36■□□□□ 0.69
COL16A1Q07092 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC19.36■□□□□ 0.69
COL16A1Q07092 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC19.36■□□□□ 0.69
COL16A1Q07092 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.36■□□□□ 0.69
COL16A1Q07092 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.35■□□□□ 0.69
COL16A1Q07092 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COL16A1Q07092 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC19.35■□□□□ 0.69
COL16A1Q07092 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.35■□□□□ 0.69
COL16A1Q07092 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC19.35■□□□□ 0.69
COL16A1Q07092 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL16A1Q07092 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 MBP-230ENST00000528160 584 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL16A1Q07092 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.35■□□□□ 0.69
COL16A1Q07092 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL16A1Q07092 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 SHMT1P1-201ENST00000419974 1312 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 LAP3P2-201ENST00000454686 1454 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL16A1Q07092 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.34■□□□□ 0.69
COL16A1Q07092 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COL16A1Q07092 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 ABCD1P4-201ENST00000399687 604 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC19.34■□□□□ 0.69
COL16A1Q07092 RPL18AP16-201ENST00000424057 531 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC19.34■□□□□ 0.69
COL16A1Q07092 PEBP1P3-201ENST00000455475 548 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 AC093300.1-201ENST00000510368 1201 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC19.34■□□□□ 0.69
COL16A1Q07092 MIR4265-201ENST00000582152 99 ntBASIC19.34■□□□□ 0.69
COL16A1Q07092 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.34■□□□□ 0.69
COL16A1Q07092 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
COL16A1Q07092 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
COL16A1Q07092 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL16A1Q07092 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.33■□□□□ 0.69
COL16A1Q07092 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 AC010491.1-201ENST00000563101 2797 ntBASIC19.33■□□□□ 0.69
COL16A1Q07092 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.33■□□□□ 0.69
COL16A1Q07092 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC19.33■□□□□ 0.69
COL16A1Q07092 AP001462.1-201ENST00000594089 452 ntBASIC19.33■□□□□ 0.69
COL16A1Q07092 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC19.33■□□□□ 0.69
COL16A1Q07092 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
COL16A1Q07092 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COL16A1Q07092 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COL16A1Q07092 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.33■□□□□ 0.69
COL16A1Q07092 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL16A1Q07092 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COL16A1Q07092 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.33■□□□□ 0.68
COL16A1Q07092 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL16A1Q07092 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms