Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.18■□□□□ 0.18
SNRPFP62306 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.18■□□□□ 0.18
SNRPFP62306 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SNRPFP62306 AC005912.2-201ENST00000619492 2400 ntBASIC16.18■□□□□ 0.18
SNRPFP62306 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.18■□□□□ 0.18
SNRPFP62306 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNRPFP62306 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.17■□□□□ 0.18
SNRPFP62306 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 ANKRD19P-201ENST00000338192 862 ntBASIC16.17■□□□□ 0.18
SNRPFP62306 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRPFP62306 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRPFP62306 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRPFP62306 AC022210.1-201ENST00000449856 793 ntBASIC16.17■□□□□ 0.18
SNRPFP62306 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.17■□□□□ 0.18
SNRPFP62306 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.17■□□□□ 0.18
SNRPFP62306 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRPFP62306 MIR4683-201ENST00000579659 81 ntBASIC16.17■□□□□ 0.18
SNRPFP62306 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRPFP62306 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SNRPFP62306 MIR6775-201ENST00000617557 69 ntBASIC16.17■□□□□ 0.18
SNRPFP62306 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNRPFP62306 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SNRPFP62306 AC009093.10-201ENST00000641956 1442 ntBASIC16.17■□□□□ 0.18
SNRPFP62306 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.17■□□□□ 0.18
SNRPFP62306 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNRPFP62306 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SNRPFP62306 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SNRPFP62306 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 AC007191.1-201ENST00000623179 2995 ntBASIC16.16■□□□□ 0.18
SNRPFP62306 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 BX640514.1-201ENST00000583223 1918 ntBASIC16.16■□□□□ 0.18
SNRPFP62306 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNRPFP62306 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRPFP62306 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.16■□□□□ 0.18
SNRPFP62306 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.16■□□□□ 0.18
SNRPFP62306 CSF2RBP1-201ENST00000447905 391 ntBASIC16.16■□□□□ 0.18
SNRPFP62306 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.16■□□□□ 0.18
SNRPFP62306 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 412.3 ms