Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK1P53667 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK1P53667 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.73□□□□□ -0.05
LIMK1P53667 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.73□□□□□ -0.05
LIMK1P53667 PIN4P1-201ENST00000451079 396 ntBASIC14.73□□□□□ -0.05
LIMK1P53667 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.73□□□□□ -0.05
LIMK1P53667 MIR4783-201ENST00000580343 82 ntBASIC14.73□□□□□ -0.05
LIMK1P53667 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 AL136301.1-201ENST00000615830 422 ntBASIC14.73□□□□□ -0.05
LIMK1P53667 AC007191.1-201ENST00000623179 2995 ntBASIC14.73□□□□□ -0.05
LIMK1P53667 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LIMK1P53667 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 AC106881.1-201ENST00000605849 3329 ntBASIC14.73□□□□□ -0.05
LIMK1P53667 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.73□□□□□ -0.05
LIMK1P53667 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.73□□□□□ -0.05
LIMK1P53667 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIMK1P53667 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LIMK1P53667 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 PRAL-201ENST00000624952 3286 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 LINC01101-201ENST00000622953 1884 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 RN7SL67P-201ENST00000492147 296 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 HLA-J-204ENST00000495278 958 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK1P53667 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.72□□□□□ -0.05
LIMK1P53667 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.72□□□□□ -0.05
LIMK1P53667 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK1P53667 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.72□□□□□ -0.05
LIMK1P53667 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.72□□□□□ -0.05
LIMK1P53667 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 AC148477.9-201ENST00000623974 539 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 AC127024.7-201ENST00000625101 200 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 AP000593.2-201ENST00000542775 1433 ntBASIC14.72□□□□□ -0.05
LIMK1P53667 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LIMK1P53667 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIMK1P53667 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.72□□□□□ -0.05
LIMK1P53667 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms