Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR4P51571 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR4P51571 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.7□□□□□ -0.22
SSR4P51571 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SSR4P51571 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SSR4P51571 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR4P51571 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SSR4P51571 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SSR4P51571 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR4P51571 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 MIR1247-201ENST00000408206 136 ntBASIC13.69□□□□□ -0.22
SSR4P51571 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 KRT8P13-201ENST00000463294 1010 ntBASIC13.69□□□□□ -0.22
SSR4P51571 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 ALG3P1-201ENST00000508806 1114 ntBASIC13.69□□□□□ -0.22
SSR4P51571 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.69□□□□□ -0.22
SSR4P51571 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 AC008825.2-201ENST00000603374 718 ntBASIC13.69□□□□□ -0.22
SSR4P51571 AC244093.1-201ENST00000610837 814 ntBASIC13.69□□□□□ -0.22
SSR4P51571 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.69□□□□□ -0.22
SSR4P51571 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SSR4P51571 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.69□□□□□ -0.22
SSR4P51571 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR4P51571 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR4P51571 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR4P51571 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
SSR4P51571 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SSR4P51571 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.69□□□□□ -0.22
SSR4P51571 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SSR4P51571 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
SSR4P51571 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.68□□□□□ -0.22
SSR4P51571 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.68□□□□□ -0.22
SSR4P51571 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SSR4P51571 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 AC010141.1-201ENST00000411585 623 ntBASIC13.68□□□□□ -0.22
SSR4P51571 GPAA1P2-201ENST00000417923 928 ntBASIC13.68□□□□□ -0.22
SSR4P51571 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSR4P51571 GCOM2-201ENST00000509133 1104 ntBASIC13.68□□□□□ -0.22
SSR4P51571 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 AC126915.1-201ENST00000522847 1038 ntBASIC13.68□□□□□ -0.22
SSR4P51571 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.68□□□□□ -0.22
SSR4P51571 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.68□□□□□ -0.22
SSR4P51571 AC131206.1-201ENST00000538078 1211 ntBASIC13.68□□□□□ -0.22
SSR4P51571 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.68□□□□□ -0.22
SSR4P51571 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms