Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.69□□□□□ -0.06
CXCL12P48061 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.69□□□□□ -0.06
CXCL12P48061 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CXCL12P48061 IL9RP3-201ENST00000442856 1674 ntBASIC14.69□□□□□ -0.06
CXCL12P48061 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CXCL12P48061 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.69□□□□□ -0.06
CXCL12P48061 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.69□□□□□ -0.06
CXCL12P48061 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.69□□□□□ -0.06
CXCL12P48061 PSMD4P1-201ENST00000433951 1109 ntBASIC14.69□□□□□ -0.06
CXCL12P48061 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 AC024293.1-201ENST00000467930 498 ntBASIC14.69□□□□□ -0.06
CXCL12P48061 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.69□□□□□ -0.06
CXCL12P48061 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.69□□□□□ -0.06
CXCL12P48061 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.69□□□□□ -0.06
CXCL12P48061 AC003686.1-201ENST00000550956 1034 ntBASIC14.69□□□□□ -0.06
CXCL12P48061 MIR4472-1-201ENST00000584349 80 ntBASIC14.69□□□□□ -0.06
CXCL12P48061 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.69□□□□□ -0.06
CXCL12P48061 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.69□□□□□ -0.06
CXCL12P48061 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CXCL12P48061 REXO1L2P-201ENST00000425429 2069 ntBASIC14.69□□□□□ -0.06
CXCL12P48061 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL12P48061 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CXCL12P48061 KRT17P5-201ENST00000332088 839 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CXCL12P48061 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCL12P48061 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 AL357563.1-201ENST00000404728 395 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCL12P48061 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCL12P48061 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCL12P48061 AC027237.1-201ENST00000560942 655 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 HERC2P11-201ENST00000562845 725 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 AC100756.2-201ENST00000569537 736 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 AL022334.2-201ENST00000610000 484 ntBASIC14.68□□□□□ -0.06
CXCL12P48061 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL12P48061 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL12P48061 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL12P48061 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL12P48061 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL12P48061 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL12P48061 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCL12P48061 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CXCL12P48061 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 AC013726.1-201ENST00000563747 2285 ntBASIC14.67□□□□□ -0.06
CXCL12P48061 PCDHB19P-201ENST00000570871 2371 ntBASIC14.67□□□□□ -0.06
CXCL12P48061 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CXCL12P48061 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL12P48061 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms