Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.81■□□□□ 0.12
RFC1P35251 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 AC012441.1-201ENST00000446669 685 ntBASIC15.81■□□□□ 0.12
RFC1P35251 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 RN7SL752P-201ENST00000463779 287 ntBASIC15.81■□□□□ 0.12
RFC1P35251 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 AC134312.5-201ENST00000568031 1313 ntBASIC15.81■□□□□ 0.12
RFC1P35251 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.81■□□□□ 0.12
RFC1P35251 MIR5189-201ENST00000577370 114 ntBASIC15.81■□□□□ 0.12
RFC1P35251 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 AC087386.2-201ENST00000623212 4637 ntBASIC15.8■□□□□ 0.12
RFC1P35251 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 AC015656.1-201ENST00000624209 3578 ntBASIC15.8■□□□□ 0.12
RFC1P35251 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RFC1P35251 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 RN7SL837P-201ENST00000463010 287 ntBASIC15.8■□□□□ 0.12
RFC1P35251 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 AP005018.1-201ENST00000525475 301 ntBASIC15.8■□□□□ 0.12
RFC1P35251 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RFC1P35251 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.8■□□□□ 0.12
RFC1P35251 TDH-203ENST00000531764 1110 ntBASIC15.8■□□□□ 0.12
RFC1P35251 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RFC1P35251 AC027307.3-201ENST00000594262 1100 ntBASIC15.8■□□□□ 0.12
RFC1P35251 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.8■□□□□ 0.12
RFC1P35251 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFC1P35251 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFC1P35251 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC1P35251 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC1P35251 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RFC1P35251 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
RFC1P35251 AP001267.2-201ENST00000532619 2086 ntBASIC15.79■□□□□ 0.12
RFC1P35251 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RFC1P35251 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFC1P35251 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.79■□□□□ 0.12
RFC1P35251 RN7SL692P-201ENST00000464677 288 ntBASIC15.79■□□□□ 0.12
RFC1P35251 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.79■□□□□ 0.12
RFC1P35251 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.79■□□□□ 0.12
RFC1P35251 AL596325.1-201ENST00000563991 1082 ntBASIC15.79■□□□□ 0.12
RFC1P35251 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms