Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 BX640514.1-201ENST00000583223 1918 ntBASIC13.78□□□□□ -0.2
SHC1P29353 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 ACE3P-201ENST00000423435 1973 ntBASIC13.78□□□□□ -0.2
SHC1P29353 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SHC1P29353 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 AC027601.5-201ENST00000624065 2482 ntBASIC13.78□□□□□ -0.2
SHC1P29353 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 HLA-K-203ENST00000430151 1046 ntBASIC13.78□□□□□ -0.2
SHC1P29353 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.78□□□□□ -0.2
SHC1P29353 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.78□□□□□ -0.2
SHC1P29353 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.78□□□□□ -0.2
SHC1P29353 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.78□□□□□ -0.2
SHC1P29353 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.78□□□□□ -0.2
SHC1P29353 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.78□□□□□ -0.2
SHC1P29353 AP001063.1-201ENST00000568332 529 ntBASIC13.78□□□□□ -0.2
SHC1P29353 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 AC008735.3-201ENST00000596646 500 ntBASIC13.78□□□□□ -0.2
SHC1P29353 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.78□□□□□ -0.2
SHC1P29353 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 WASH3P-207ENST00000560956 1394 ntBASIC13.78□□□□□ -0.2
SHC1P29353 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SHC1P29353 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SHC1P29353 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.78□□□□□ -0.2
SHC1P29353 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.78□□□□□ -0.2
SHC1P29353 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SHC1P29353 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.78□□□□□ -0.2
SHC1P29353 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SHC1P29353 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHC1P29353 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHC1P29353 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SHC1P29353 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SHC1P29353 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SHC1P29353 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SHC1P29353 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SHC1P29353 ACTG1P3-201ENST00000431775 1114 ntBASIC13.77□□□□□ -0.21
SHC1P29353 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.77□□□□□ -0.21
SHC1P29353 KRT17P7-201ENST00000451704 1104 ntBASIC13.77□□□□□ -0.21
SHC1P29353 AC007389.4-201ENST00000454674 793 ntBASIC13.77□□□□□ -0.21
SHC1P29353 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.77□□□□□ -0.21
SHC1P29353 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SHC1P29353 GIMAP3P-201ENST00000495150 836 ntBASIC13.77□□□□□ -0.21
SHC1P29353 USP32P1-208ENST00000506594 1164 ntBASIC13.77□□□□□ -0.21
SHC1P29353 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms