Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AC097359.3-201ENST00000603982 1210 ntBASIC15.11■□□□□ 0.01
THRAP10827 AC133552.6-201ENST00000613406 534 ntBASIC15.11■□□□□ 0.01
THRAP10827 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 MIR6775-201ENST00000617557 69 ntBASIC15.11■□□□□ 0.01
THRAP10827 REXO1L2P-201ENST00000425429 2069 ntBASIC15.11■□□□□ 0.01
THRAP10827 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.11■□□□□ 0.01
THRAP10827 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
THRAP10827 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 SOCS2P1-201ENST00000417727 557 ntBASIC15.1■□□□□ 0.01
THRAP10827 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.1■□□□□ 0.01
THRAP10827 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.1■□□□□ 0.01
THRAP10827 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.1■□□□□ 0.01
THRAP10827 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 SLC25A47P1-201ENST00000531577 414 ntBASIC15.1■□□□□ 0.01
THRAP10827 TDH-203ENST00000531764 1110 ntBASIC15.1■□□□□ 0.01
THRAP10827 ENPP7P5-201ENST00000541031 1031 ntBASIC15.1■□□□□ 0.01
THRAP10827 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.1■□□□□ 0.01
THRAP10827 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.1■□□□□ 0.01
THRAP10827 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
THRAP10827 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
THRAP10827 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 AL607033.1-201ENST00000623900 1599 ntBASIC15.1■□□□□ 0.01
THRAP10827 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.1■□□□□ 0.01
THRAP10827 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
THRAP10827 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
THRAP10827 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.1■□□□□ 0.01
THRAP10827 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
THRAP10827 BEND3P1-201ENST00000421591 1944 ntBASIC15.09■□□□□ 0.01
THRAP10827 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.09■□□□□ 0.01
THRAP10827 HSPA7-201ENST00000445535 1927 ntBASIC15.09■□□□□ 0.01
THRAP10827 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THRAP10827 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.09■□□□□ 0.01
THRAP10827 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
THRAP10827 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
THRAP10827 AC027601.5-201ENST00000624065 2482 ntBASIC15.09■□□□□ 0.01
THRAP10827 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THRAP10827 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
THRAP10827 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.09■□□□□ 0.01
THRAP10827 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
THRAP10827 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.09■□□□□ 0.01
THRAP10827 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms