Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GOLGA6L16P-201ENST00000441780 1299 ntBASIC8.98□□□□□ -0.97
APOBP04114 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC8.98□□□□□ -0.97
APOBP04114 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC8.98□□□□□ -0.97
APOBP04114 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
APOBP04114 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 ANKRD26P1-203ENST00000569528 966 ntBASIC8.98□□□□□ -0.97
APOBP04114 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 AL136982.5-201ENST00000605222 294 ntBASIC8.98□□□□□ -0.97
APOBP04114 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 HPX-213ENST00000615166 826 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC8.98□□□□□ -0.97
APOBP04114 SARS-202ENST00000369923 1882 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC8.98□□□□□ -0.97
APOBP04114 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 CASP2-203ENST00000392925 616 ntTSL 3 BASIC8.98□□□□□ -0.97
APOBP04114 AC136604.1-202ENST00000425471 771 ntBASIC8.98□□□□□ -0.97
APOBP04114 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 DLK1-205ENST00000556051 469 ntTSL 2 BASIC8.98□□□□□ -0.97
APOBP04114 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC8.98□□□□□ -0.97
APOBP04114 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
APOBP04114 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 RN7SL578P-201ENST00000477781 283 ntBASIC8.97□□□□□ -0.97
APOBP04114 RN7SKP155-201ENST00000516031 288 ntBASIC8.97□□□□□ -0.97
APOBP04114 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC8.97□□□□□ -0.97
APOBP04114 AC080013.5-201ENST00000607044 679 ntBASIC8.97□□□□□ -0.97
APOBP04114 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC8.97□□□□□ -0.97
APOBP04114 NF1P11-201ENST00000621292 1282 ntBASIC8.97□□□□□ -0.97
APOBP04114 F10-203ENST00000409306 1450 ntTSL 3 BASIC8.97□□□□□ -0.97
APOBP04114 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
APOBP04114 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC8.97□□□□□ -0.97
APOBP04114 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 AC068831.5-201ENST00000557387 328 ntBASIC8.97□□□□□ -0.97
APOBP04114 AC016582.2-202ENST00000587765 1094 ntBASIC8.97□□□□□ -0.97
APOBP04114 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 BANP-204ENST00000393208 2283 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC8.97□□□□□ -0.97
APOBP04114 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
APOBP04114 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
APOBP04114 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms