Protein–RNA interactions for Protein: P02730

SLC4A1, Band 3 anion transport protein, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A1P02730 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC4A1P02730 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC4A1P02730 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC4A1P02730 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC4A1P02730 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.03
SLC4A1P02730 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC4A1P02730 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SLC4A1P02730 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC4A1P02730 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC4A1P02730 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 KRT8P35-201ENST00000483942 1338 ntBASIC15.26■□□□□ 0.03
SLC4A1P02730 AC134312.5-201ENST00000568031 1313 ntBASIC15.26■□□□□ 0.03
SLC4A1P02730 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC4A1P02730 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AC007389.4-201ENST00000454674 793 ntBASIC15.26■□□□□ 0.03
SLC4A1P02730 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AC009486.1-201ENST00000569860 813 ntBASIC15.26■□□□□ 0.03
SLC4A1P02730 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC4A1P02730 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AC055811.4-201ENST00000624039 1754 ntBASIC15.26■□□□□ 0.03
SLC4A1P02730 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SLC4A1P02730 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC4A1P02730 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC4A1P02730 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 AL139094.1-201ENST00000405549 1188 ntBASIC15.25■□□□□ 0.03
SLC4A1P02730 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 AC106760.1-201ENST00000508690 800 ntBASIC15.25■□□□□ 0.03
SLC4A1P02730 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC4A1P02730 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC4A1P02730 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 AC008735.3-201ENST00000596646 500 ntBASIC15.25■□□□□ 0.03
SLC4A1P02730 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 AL035252.4-201ENST00000624174 288 ntBASIC15.25■□□□□ 0.03
SLC4A1P02730 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC4A1P02730 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC4A1P02730 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC4A1P02730 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms