Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
IFNB1P01574 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNB1P01574 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.57■□□□□ 0.08
IFNB1P01574 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNB1P01574 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
IFNB1P01574 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
IFNB1P01574 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFNB1P01574 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFNB1P01574 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.56■□□□□ 0.08
IFNB1P01574 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.56■□□□□ 0.08
IFNB1P01574 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.56■□□□□ 0.08
IFNB1P01574 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.56■□□□□ 0.08
IFNB1P01574 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.56■□□□□ 0.08
IFNB1P01574 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
IFNB1P01574 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
IFNB1P01574 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
IFNB1P01574 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.56■□□□□ 0.08
IFNB1P01574 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
IFNB1P01574 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 CICP4-201ENST00000447359 2812 ntBASIC15.56■□□□□ 0.08
IFNB1P01574 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFNB1P01574 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.55■□□□□ 0.08
IFNB1P01574 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
IFNB1P01574 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.55■□□□□ 0.08
IFNB1P01574 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.55■□□□□ 0.08
IFNB1P01574 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.55■□□□□ 0.08
IFNB1P01574 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 AL662799.1-202ENST00000614205 422 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 AC006504.5-208ENST00000588784 2401 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFNB1P01574 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.55■□□□□ 0.08
IFNB1P01574 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.55■□□□□ 0.08
IFNB1P01574 HSPA7-201ENST00000445535 1927 ntBASIC15.55■□□□□ 0.08
IFNB1P01574 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms