Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC015909.3-201ENST00000572855 1794 ntBASIC18.41■□□□□ 0.54
CACNA1FO60840 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 AC099063.4-201ENST00000641099 1602 ntBASIC18.41■□□□□ 0.54
CACNA1FO60840 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1FO60840 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1FO60840 AC104073.2-201ENST00000453737 312 ntBASIC18.41■□□□□ 0.54
CACNA1FO60840 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA1FO60840 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CACNA1FO60840 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 CCT8L1P-201ENST00000465400 1674 ntBASIC18.41■□□□□ 0.54
CACNA1FO60840 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 AL157791.1-201ENST00000553667 1699 ntBASIC18.41■□□□□ 0.54
CACNA1FO60840 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA1FO60840 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 AC084346.2-201ENST00000607097 949 ntBASIC18.41■□□□□ 0.54
CACNA1FO60840 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1FO60840 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1FO60840 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1FO60840 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CACNA1FO60840 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1FO60840 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1FO60840 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1FO60840 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1FO60840 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 RN7SL11P-201ENST00000471305 293 ntBASIC18.4■□□□□ 0.54
CACNA1FO60840 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1FO60840 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CACNA1FO60840 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1FO60840 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.4■□□□□ 0.54
CACNA1FO60840 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1FO60840 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.4■□□□□ 0.54
CACNA1FO60840 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1FO60840 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1FO60840 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1FO60840 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1FO60840 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA1FO60840 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA1FO60840 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA1FO60840 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.39■□□□□ 0.54
CACNA1FO60840 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA1FO60840 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA1FO60840 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.39■□□□□ 0.53
CACNA1FO60840 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNA1FO60840 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CACNA1FO60840 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1FO60840 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1FO60840 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA1FO60840 DBET-201ENST00000630918 3363 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms