Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 AC093214.1-201ENST00000511688 1107 ntBASIC14.45□□□□□ -0.1
SLC28A1O00337 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A1O00337 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A1O00337 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A1O00337 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC28A1O00337 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 AC106028.4-201ENST00000614509 607 ntBASIC14.45□□□□□ -0.1
SLC28A1O00337 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SLC28A1O00337 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 RNU1-114P-201ENST00000365297 166 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 SOCS2P1-201ENST00000417727 557 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 TLE1P1-201ENST00000422965 589 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 GIMAP3P-201ENST00000495150 836 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 AC026434.2-201ENST00000506094 1078 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC28A1O00337 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC28A1O00337 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC28A1O00337 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC28A1O00337 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 AC093726.1-201ENST00000608064 963 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 SLC7A15P-201ENST00000424028 1363 ntBASIC14.44□□□□□ -0.1
SLC28A1O00337 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC28A1O00337 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC28A1O00337 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC28A1O00337 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLC28A1O00337 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
SLC28A1O00337 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC28A1O00337 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLC28A1O00337 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC28A1O00337 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms