Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 AC004870.1-201ENST00000315132 882 ntBASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 HLA-K-203ENST00000430151 1046 ntBASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 AC000095.1-201ENST00000603208 874 ntBASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 KRT8P35-201ENST00000483942 1338 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 RNA5SP416-201ENST00000516838 111 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AL079307.3-201ENST00000556114 283 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AC092364.2-202ENST00000597012 1073 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AC003101.2-201ENST00000612557 442 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AC007967.4-201ENST00000614700 386 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRDV1A0A1B0GX56 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms