Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 AC138649.2-201ENST00000615886 705 ntBASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 AL023803.2-201ENST00000620080 638 ntBASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSX2IPQ9Y2D8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 PRAL-201ENST00000624952 3286 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 EIF4HP1-201ENST00000453115 687 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AL391280.1-201ENST00000506969 1062 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 RHOQP1-201ENST00000555758 579 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AC106820.3-201ENST00000561653 397 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AC073413.1-201ENST00000603927 732 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 AC013268.4-201ENST00000637413 2228 ntBASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.14■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AP002414.2-201ENST00000591780 3365 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 SERPINA13P-202ENST00000478994 924 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 MESTP3-201ENST00000503460 968 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ACTG1P17-201ENST00000558391 1119 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 DUX4L47-201ENST00000566374 394 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AC138466.3-201ENST00000619983 221 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SSX2IPQ9Y2D8 AC055811.4-201ENST00000624039 1754 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms