Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 RNA5SP491-201ENST00000362936 118 ntBASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 LINC00528-201ENST00000600723 2160 ntBASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 AC127002.1-201ENST00000619123 455 ntBASIC22.68■■□□□ 1.22
RIMBP3Q9UFD9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 U3.5-201ENST00000363448 216 ntBASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 BCAR1P1-201ENST00000553953 636 ntBASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 AC140658.4-201ENST00000561990 352 ntBASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
RIMBP3Q9UFD9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 FAM187B2P-201ENST00000577135 713 ntBASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 PCDHB19P-201ENST00000570871 2371 ntBASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RIMBP3Q9UFD9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 CCL19-202ENST00000378800 414 ntTSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AC138392.1-201ENST00000427577 921 ntBASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AC074019.1-201ENST00000428788 1096 ntBASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AACSP1-202ENST00000521412 1095 ntBASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 SSR4P1-203ENST00000599569 2260 ntBASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 GUCY2EP-203ENST00000531117 1918 ntBASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RIMBP3Q9UFD9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms