Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 BOLA2P3-201ENST00000404566 256 ntBASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AL162274.1-201ENST00000617191 1098 ntBASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AC132938.4-201ENST00000623835 848 ntBASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 AC126335.2-201ENST00000623362 4637 ntBASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PARPBPQ9NWS1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AL122018.1-201ENST00000446607 2310 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AP000845.1-201ENST00000581677 2131 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 REXO1L5P-201ENST00000622260 2098 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AC016694.1-201ENST00000434179 700 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 BCRP2-202ENST00000447763 634 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 USP32P1-208ENST00000506594 1164 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 BCRP6-201ENST00000510112 632 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 BCRP7-201ENST00000511549 544 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 RPSAP52-203ENST00000622976 1023 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 ZBED1P1-201ENST00000502364 1930 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.48□□□□□ -0.25
PARPBPQ9NWS1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms