Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AL355994.2-201ENST00000447882 704 ntBASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 CROCCP4-201ENST00000457096 498 ntBASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 FTH1P14-201ENST00000482930 551 ntBASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AL022328.1-201ENST00000610050 478 ntBASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AC244669.2-201ENST00000612320 853 ntBASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 ELK2AP-201ENST00000392510 1007 ntBASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 BRWD1P1-201ENST00000401091 371 ntBASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 MIR1908-201ENST00000410394 80 ntBASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AL583810.1-201ENST00000553344 1045 ntBASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CUEDC1Q9NWM3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AC013726.1-201ENST00000563747 2285 ntBASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.54□□□□□ -0.08
CUEDC1Q9NWM3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms