Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 TLE1P1-201ENST00000422965 589 ntBASIC16.25■□□□□ 0.19
HIPK3Q9H422 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.25■□□□□ 0.19
HIPK3Q9H422 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HIPK3Q9H422 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 PRAL-201ENST00000624952 3286 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AC012362.1-201ENST00000434906 739 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AL645933.1-201ENST00000440087 609 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AL035414.1-201ENST00000451327 857 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AC093752.3-201ENST00000567343 901 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 RPL17P45-201ENST00000586289 509 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 AC133540.1-201ENST00000620845 1019 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 CYP4F23P-201ENST00000593402 1579 ntBASIC16.24■□□□□ 0.19
HIPK3Q9H422 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HIPK3Q9H422 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HIPK3Q9H422 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK3Q9H422 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
HIPK3Q9H422 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.23■□□□□ 0.19
HIPK3Q9H422 AC105250.1-201ENST00000509378 2057 ntBASIC16.23■□□□□ 0.19
HIPK3Q9H422 LINC01165-201ENST00000445190 1623 ntBASIC16.23■□□□□ 0.19
HIPK3Q9H422 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK3Q9H422 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.23■□□□□ 0.19
HIPK3Q9H422 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HIPK3Q9H422 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms