Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 AL022334.2-201ENST00000610000 484 ntBASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RTFDC1Q9BY42 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTFDC1Q9BY42 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 HIST2H2BA-201ENST00000412169 381 ntBASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 DUX4L50-201ENST00000455245 715 ntBASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 AP000911.2-201ENST00000534330 502 ntBASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 KRT8P28-201ENST00000433288 1390 ntBASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTFDC1Q9BY42 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 PPT1-215ENST00000641471 2368 ntBASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 Z69890.1-201ENST00000382990 339 ntBASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 AC141586.1-203ENST00000567242 366 ntBASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTFDC1Q9BY42 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AC008741.2-201ENST00000612792 3115 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 AL162727.3-201ENST00000635661 2787 ntBASIC17.87■□□□□ 0.45
RTFDC1Q9BY42 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms