Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PCGF1Q9BSM1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 AC009090.5-201ENST00000624886 2285 ntBASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 MIR1909-201ENST00000411312 80 ntBASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 BAATP1-201ENST00000412284 1225 ntBASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 AC093433.1-201ENST00000458048 571 ntBASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 AL138799.1-201ENST00000448213 1675 ntBASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PCGF1Q9BSM1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AC107918.4-201ENST00000641966 3141 ntBASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 BOLA2P3-201ENST00000404566 256 ntBASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AC133552.6-201ENST00000613406 534 ntBASIC12.66□□□□□ -0.38
PCGF1Q9BSM1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms